Koray Dogan K.

PhD-trained Bioinformatics Scientist & Developer with 12+ years at NIH, combining deep genomics expertise with robust software engineering. I design and implement full-stack tools for RNA-seq, single-cell, and multi-omics pipelines — powered by scalable backends (Python, R, Java, C++) and interactive web interfaces (HTML/JS). My solutions integrate Snakemake/Nextflow workflows, cloud computing (AWS), and data visualization, tailored for translational science, discovery, and biotech. Core Bioinformatics Services: RNA-seq, splicing, and isoform quantification (Seurat, edgeR, rMATS) ATAC-seq, Hi-C, MERFISH integration Bulk & single-cell workflows with Snakemake or Nextflow Statistical analysis and figure generation (ggplot2, ComplexHeatmap) Software & Dev Expertise: Python, R, Bash, Java, C++ Git, GitHub Actions, Docker REST API integration, tool deployment Web & UI Development: HTML5, CSS3, JavaScript (jQuery, D3.js, Chart.js) Interactive data dashboards for scientific tools NIH-level scripting and interface design Whether you need a research pipeline, automated workflow, or a bioinformatics tool with a polished front-end, I deliver modular, documented, and production-ready solutions. Let’s build something powerful from your data.